Fox, impressed with the job that Whedon had done getting “Speed” into shape, gave him the unenviable task of reviving the powerhouse “Alien” franchise after David Fincher’s morose third entry. Always one to put a super-powered young girl at the center of whatever project he’s working on, Whedon concocted a thirty-page outline that focused on Newt, a character from James Cameron’s “Aliens” who Sigourney Weaver’s Ripley protected with a motherly intensity. (Ripley, like every other character, had been killed off at the end of “Alien 3.”) Whedon turned in his treatment, which was met enthusiastically by Fox brass, until they insisted he change pretty much everything about the script, demanding he find a way to bring back Ripley. The Newt incarnation remains Whedon’s favorite version of the half-dozen drafts he ended up submitting, noting in "Joss Whedon: Conversations" that it was a “better-structured story than the one I ultimately wrote.” Ultimately Whedon’s draft would focus on the crew of the Betty, a smuggler ship not unlike the Millennium Falcon (or, later, Whedon’s own Serenity), tasked to deliver some very precious cargo to the hulking Auriga space ship. Set in the distant future, Whedon replaced the earlier films’ menacing multinational corporation with a more sinister version of the army, and Ripley, back from the dead and none-too-pleased, was now something of a hybrid – having been brought back from genetic material contaminated with alien DNA, giving her some of the monsters’ abilities. Supposedly Whedon’s first draft of the Ripley version went over like gangbusters, and featured a harrowing climax set on Earth. But the rapturous reception of Whedon’s screenplay was the only smooth part of the film’s long, tortured production. Keeping with the series’ tradition of going with an untested visionary to helm the film, the studio contacted Danny Boyle, Bryan Singer and Peter Jackson before ultimately deciding on Jean-Pierre Jeunet, the darkly comic co-director of French oddities “Delicatessen” and “The City of Lost Children.” Jeunet imported much of his creative team from France, and spoke with a translator, unable to communicate directly to the cast and crew, conveying staging and camera movements via detailed storyboards. Eschewing the third film’s oppressive bleakness, Jeunet’s film was more comic and comic book, featuring strange sexual overtones and a prolonged underwater sequence that felt like something out of “The Poseidon Adventure.” Whedon was not pleased. Not only was he asked to change the ending five times (until a climax on Earth was jettisoned completely) but Whedon was not involved in the film’s production at all. Whedon was particularly miffed by a sequence where Ripley has a semi-sexual encounter with an albino mutant alien that she helped birth (the creature was designed by Chris Cunningham). “I don’t remember writing, ‘A withered, granny-lookin’ Pumpkinhead-kind-of-thing makes out with Ripley.’ Pretty sure that stage direction wasn’t in any of my drafts,” Whedon quipped. While diplomatic during the press for the movie, in recent years he’s been more forthcoming, telling Bullz-Eye circa “Serenity” that “it wasn’t a question of doing everything differently, it was mostly a matter of doing everything wrong. They said the lines...mostly...but they said them all wrong. And they cast it wrong. And they designed it wrong. And they scored it wrong. They did everything wrong that they could possibly do. There’s actually a fascinating lesson in filmmaking, because everything that they did reflects back to the script or looks like something from the script, and people assume that, if I hated it, then they’d changed the script...but it wasn’t so much that they’d changed the script; it’s that they just executed it in such a ghastly fashion as to render it almost unwatchable.” A director’s cut of the film was released on home video a few years back but those looking for more of Whedon’s original draft will be sorely disappointed. Instead there are a few more gonzo Jeunet flourishes in a film already lousy with them.